Anne Musters

54 CHAPTER 3 14 Klarenbeek PL, Tak PP, van Schaik BD, Zwinderman AH, Jakobs ME, Zhang Z, van Kampen AH, van Lier RA, Baas F, de Vries N. 2010; Human T-cell memory consists mainly of unexpanded clones. Immunol Lett. 133(1):42–8. 15 van Gisbergen K, Klarenbeek P, Kragten N, Unger P, Nieuwenhuis M, Wensveen F, ten Brinke A, Tak P, Eldering E, Nolte M, van Lier R. 2011; The costimulatory molecule CD27 maintains clonally diverse CD8+ T cell responses of low antigen affinity to protect against viral variants. Immunity. 35(1):97–108. 16 Cantaert T, Doorenspleet ME, Francosalinas G, Paramarta JE, Klarenbeek PL, Tiersma Y, Van Der Loos CM, De Vries N, Tak P-P, Baeten DL. 2012; Increase of CD5(+) B lymphocytes with a regulatory phenotype in spondyloarthritis. Arthritis Rheum. 64(6):1859– 68. 17 Pollastro SP, Musters A, Balzaretti G, Niewold I, van Schaik BS, Hässler S, Verhoef CM, Pallardy M, van Kampen AHC, Mariette X, de Vries N, Consortium O behalf of the A. Sensitive B-cell receptor repertoire analysis shows repopulation correlates with clinical response to rituximab in rheumatoid arthritis. Submitted. 18 Doorenspleet ME, Klarenbeek PL, de Hair MJH, van Schaik BDC, Esveldt REE, van Kampen AHC, Gerlag DM, Musters A, Baas F, Tak PP, de Vries N. 2014; Rheumatoid arthritis synovial tissue harbours dominant B-cell and plasma-cell clones associated with autoreactivity. Ann Rheum Dis. 73(4):756–62. 19 Wolda H. 1981; Similarity indices, sample size and diversity. Oecologia. 50(3):296–302. 20 Horn HS. 1966; Measurement of “overlap” in comparative ecological studies. Amercan Nat. 100(914):419–24. 21 Chao A, Chazdon RL, Colwell RK, Shen TJ. 2006; Abundance-based similarity indices and their estimation when there are unseen species in samples. Biometrics. 62(2):361– 71. 22 Chao A, Chazdon RL, Shen TJ. 2005; A new statistical approach for assessing similarity of species composition with incidence and abundance data. Ecol Lett. 8(2):148–59. 23 Pozsgay J, Szekanecz Z, Sármay G. 2017; Antigen-specific immunotherapies in rheumatic diseases. Nat Rev Rheumatol. 13(9):525–37. 24 Xiang SD, Benson EM, Dunn IS. 2001; Tracking membrane and secretory immunoglobulin alpha heavy chain mRNA variation during B-cell differentiation by real-time quantitative polymerase chain reaction. Immunol Cell Biol. 79(5):472–81. 25 Eckmann L, Huang GT, Smith JR, Morzycka-Wroblewska E, Kagnoff MF. 1994; Increased transcription and coordinate stabilization of mRNAs for secreted immunoglobulin alpha heavy chain and kappa light chain following stimulation of immunoglobulin A expressing B cells. J Biol Chem. 269(52):33102–8.

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