Supplemental file 4. Results of whole genome sequencing Details of sequenced isolates showing their identification, isolation location, conventional sequence type, cg/wgMLST clustering info and a selection of antibiotic resistance genes detected by CARD analysis. The CARD analysis was focused on different types of betalactamases (illustrated with different colors) and aminoglycoside modifying enzymes. A black background indicates presence of the gene. Numbers indicate the percentage of similarity to the CARD reference sequence. Beta-lactamase ESBL type beta-lactamase ampC type beta-lactamase Carbapenemase Aminoglycoside modifying enzyme Miscellaneous Legend E. faecium M-026 new ST117 A 98.9 100.0 100.0 99.4 E. faecium M-027 new ST117 A 98.9 100.0 100.0 99.4 E. faecium M-030 new ST117 A 98.9 100.0 100.0 99.4 rep2, rep11a, repUS15 rep2, rep11a, repUS15 cg/wgMLST Cluster AAC(6')-Ii aad(6) APH(3')-IIIa vanB Plasmid replicon types rep2, rep11a, repUS15 MLST Species Building Sample nr. 178 Chapter 3.2
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