Species Sample nr. Building cg/wgMLST Cluster OXA-1 OXA-10 TEM-1 CTX-M-15 CTX-M-238 SHV-66 CMY-48 CMY-65 CMY-81 KPC-2 AAC(3)-IId AAC(3)-IIe AAC(6')-Ib8 AAC(6')-Ib-cr6 AAC(6')-If aadA2 aadA3 ANT(2'')-Ia ANT(3'')-IIa APH(3')-Ia MCR-9.1 C. amalonaticus M-123 old N.A. N.A. 100.0 100.0 99.0 99.0 C. freundii M-116 old ST169 A 100.0 100.0 100.0 100.0 98.2 100.0 C. freundii M-129 old ST169 A 100.0 100.0 C. freundii M-1490 old ST169 A 100.0 100.0 C. freundii M-1494 old ST169 A 100.0 100.0 C. freundii M-035 old ST311 B 99.7 100.0 100.0 C. freundii M-137 old ST311 B 99.7 100.0 100.0 C. freundii M-118 old ST111 unique 100.0 100.0 100.0 100.0 99.0 99.0 99.6 100.0 C. freundii M-150 old ST125 unique 100.0 97.2 98.5 100.0 IncX3, pKPC-CAV1321 IncX3, pKPC-CAV1321 IncC, IncR IncFII(SARC14) IncFIB(pHCM2), IncR, IncX5 Plasmid replicon types IncFIB(K) IncFIB(pHCM2), IncR, IncX5 IncFIB(pHCM2), IncR, IncX5 IncFIB(pHCM2), IncR, IncX5 Species Sample nr. Building MLST cg/wgMLST Cluster LAP-2 OXA-1 OXA-9 TEM-1 CTX-M-9 CTX-M-15 GES-1 SHV-66 ACT-6 ACT-17 ACT-24 ACT-57 MIR-20 MIR-23 OXA-48 AAC(3)-IIe AAC(6')-Ib10 AAC(6')-Ib4 AAC(6')-Ib-cr4 AAC(6')-Ib-cr6 aadA aadA2 aadA3 ANT(2'')-Ia ANT(3'')-IIa APH(3'')-Ib APH(6)-Id MCR-9.1 E. asburiae M-132 old ST484 A 100.0 100.0 100.0 99.0 99.0 99.0 99.6 99.6 99.6 100.0 E. asburiae M-144 old ST484 A 100.0 100.0 99.0 99.0 99.0 99.6 99.6 99.6 100.0 E. asburiae M-142 old ST484 A 100.0 100.0 99.0 99.6 99.6 99.6 100.0 E. asburiae M-146 old ST484 A 100.0 100.0 100.0 99.0 99.0 100.0 99.6 99.6 99.6 100.0 E. asburiae M-152 old ST25 unique 99.7 100.0 96.7 98.5 100.0 100.0 E. hormaechei subsp. hoffmannii M-125 old ST78 C 100.0 100.0 100.0 100.0 98.4 E. hormaechei subsp. hoffmannii M-138 old ST78 C 100.0 100.0 100.0 100.0 98.4 E. hormaechei subsp. hoffmannii M-1488 old ST78 C 100.0 100.0 100.0 100.0 98.4 E. hormaechei subsp. hoffmannii M-1491 old ST78 C 100.0 100.0 100.0 100.0 98.4 E. hormaechei subsp. hoffmannii M-1456 new ST78 D 100.0 100.0 100.0 100.0 98.4 E. hormaechei subsp. hoffmannii M-1458 new ST78 D 100.0 100.0 100.0 E. hormaechei subsp. hoffmannii M-1459 new ST78 D 100.0 100.0 100.0 E. hormaechei subsp. steigerwaltii M-135 old ST45 unique 100.0 100.0 99.6 99.6 E. roggenkampii M-121 old new B 100.0 E. roggenkampii M-131 old new B 100.0 E. roggenkampii M-148 old ST1576 unique 100.0 100.0 100.0 100.0 99.0 100.0 100.0 99.6 IncFIB(pECLA), IncFII(pECLA), IncN Col(pHAD28), IncFIB(pHCM2), IncL Col(pHAD28), IncFIB(pHCM2), IncL Col(pHAD28), IncFIB(pECLA) none none Col(pHAD28), IncFIB(pHCM2), IncL, IncQ2 Col(pHAD28), IncFIB(pHCM2), IncL, IncQ2 Col(pHAD28), IncFIB(pHCM2), IncL, IncQ2 Col(pHAD28), IncFIB(pHCM2), IncL, IncQ2 Col(pHAD28), IncFIB(pHCM2), IncL, IncQ2 IncFIB(pECLA), IncFII(pECLA) IncFIB(pECLA), IncFII(pECLA) IncFIB(pECLA), IncFII(pECLA) IncFIB(pECLA), IncFII(pECLA) IncFIB(pECLA), IncFII(pECLA), IncHI2, IncHI2A Plasmid replicon types 180 Chapter 3.2
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