N.A. Not applicable. # In P. aeruginosa ST111 the VIM-2 gene is reported to be flanked by AAC(6')-29a and AAC(6')-29b elements. Due to the limitations of short-read sequencing only, these do not always end up in the assembly and thus remain unnoticed by CARD analysis. Presence of these elements was verified by a resequencing approach. Species Sample nr. Building MLST cg/wgMLST Cluster OXA-1 SHV-1 SHV-201 TEM-1 CTX-M-14 CTX-M-15 DHA-1 AAC(3)-IId AAC(3)-IIe AAC(6')-Ib-cr6 aadA2 APH(3')-Ia APH(3'')-Ib APH(6)-Id K. aerogenes M-151 old N.A. N.A. 100.0 100.0 100.0 K. pneumoniae M-083 new ST45 unique 100.0 100.0 100.0 100.0 100.0 99.0 98.5 K. pneumoniae M-114 old ST1564 unique 100.0 100.0 100.0 100.0 99.0 99.0 99.6 99.6 K. pneumoniae M-133 old ST16 unique 100.0 100.0 100.0 100.0 99.0 100.0 Col440II, IncFIB(K), IncFII(K) Plasmid replicon types ColRNAI, IncI1-I(Alpha), IncX3 Col156, IncFIB(AP001918), IncFIB(K), IncFII(29), IncFII(K), IncFII(pKP91), IncR IncFIB(K) 3 181 Environmental contamination with MDRO in single-occupancy rooms
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