117 4 Proteomic signature of macrophages cultured on collagen type 1 Table 2: Effect of collagen morphology on the protein expression profile of macrophages. Gene name Protein name Fold change F/G p-value Serpinf1 Pigment epithelium-derived factor 12.66 3.13E-02 Dctn4 Dynactin subunit 4 9.97 3.13E-02 Rbm42 RNA-binding protein 42 9.86 3.13E-02 Mrps15 28S ribosomal protein S15, mitochondrial 9.52 3.13E-02 Atp7a Copper-transporting ATPase 1 6.11 3.13E-02 Ppic Peptidyl-prolyl cis-trans isomerase C 4.97 3.13E-02 Prim2 DNA primase large subunit 3.83 3.13E-02 Trim23 E3 ubiquitin-protein ligase TRIM23 3.64 3.13E-02 Mmp8 Neutrophil collagenase 3.63 3.13E-02 Uba5 Ubiquitin-like modifier-activating enzyme 5 3.40 3.13E-02 Plekha2 Pleckstrin homology domain-containing family A member 2 3.12 3.13E-02 Tmsb4x Thymosin beta-4 3.09 3.13E-02 Unc45a Protein unc-45 homolog A 2.61 3.13E-02 Ercc4 DNA repair endonuclease XPF 2.51 3.13E-02 Retreg3 Reticulophagy regulator 3 2.41 3.13E-02 Cybc1 Cytochrome b-245 chaperone 1 2.25 3.13E-02 Yipf4 Protein YIPF4 2.24 3.13E-02 Gdi1 Rab GDP dissociation inhibitor alpha 2.12 3.13E-02 Rdh11 Retinol dehydrogenase 11 2.11 3.13E-02 Rab11b Ras-related protein Rab-11B 2.10 3.13E-02 Rtn3 Reticulon-3 2.05 3.13E-02 Wtap Pre-mRNA-splicing regulator WTAP 2.05 3.13E-02 Apoo MICOS complex subunit Mic26 (Apolipoprotein O) 2.02 3.13E-02 Pdxk Pyridoxal kinase 0.50 3.13E-02 Txnrd1 Thioredoxin reductase 1, cytoplasmic 0.44 3.13E-02 Ncbp1 Nuclear cap-binding protein subunit 1 0.41 3.13E-02 Tram1 Translocating chain-associated membrane protein 1 0.39 3.13E-02
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