Appendix 276 The mass spectral features associated with Immune Response Type 2 were determined by protein set enrichment analysis using the 49-sample reference set with both mass spectral data and protein expression data using the methods described in Grigorieva et al21. They are listed in Supplementary Table 8. Supplementary Table 8: Subset of mass spectral features identified as being associated with immune response type 2 and used in development of Classifier C. The center m/Z rounded to whole Daltons is provided. Rounded center m/Z Rounded center m/Z Rounded center m/Z 3111 5795 11584 3157 5935 11843 3177 6009 11890 3396 6175 11913 3888 8216 11997 4642 9934 13796 5186 10848 14787 5693 11056 14882 5734 11443 23353 5750 11531
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